Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm7284-201ENSMUST00000131667 944 ntBASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm2272-201ENSMUST00000194903 582 ntBASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm45167-201ENSMUST00000208007 322 ntBASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-5A0A075B6B9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44357-201ENSMUST00000195897 142 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm19658-201ENSMUST00000196231 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44367-201ENSMUST00000196836 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44350-201ENSMUST00000197197 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44390-201ENSMUST00000197533 144 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44313-201ENSMUST00000198018 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44486-201ENSMUST00000198508 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44314-201ENSMUST00000199263 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44394-201ENSMUST00000199558 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44484-201ENSMUST00000199873 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44466-201ENSMUST00000200264 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm44359-201ENSMUST00000200671 138 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-5A0A075B6B9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms