Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Gm5587-201ENSMUST00000206270 674 ntBASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav7n-4A0A075B620 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav7n-4A0A075B620 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Gm8097-201ENSMUST00000117903 829 ntBASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms