Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
CcsQ9WU84 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CcsQ9WU84 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.09□□□□□ -0.63
CcsQ9WU84 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Gm13418-201ENSMUST00000119097 944 ntBASIC11.09□□□□□ -0.63
CcsQ9WU84 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.09□□□□□ -0.63
CcsQ9WU84 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Gm6257-201ENSMUST00000163864 910 ntBASIC11.09□□□□□ -0.63
CcsQ9WU84 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.09□□□□□ -0.63
CcsQ9WU84 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.09□□□□□ -0.63
CcsQ9WU84 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.09□□□□□ -0.63
CcsQ9WU84 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CcsQ9WU84 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CcsQ9WU84 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.08□□□□□ -0.63
CcsQ9WU84 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.08□□□□□ -0.64
CcsQ9WU84 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.08□□□□□ -0.64
CcsQ9WU84 Gm43514-201ENSMUST00000198852 424 ntBASIC11.08□□□□□ -0.64
CcsQ9WU84 Gm6443-201ENSMUST00000203599 874 ntBASIC11.08□□□□□ -0.64
CcsQ9WU84 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CcsQ9WU84 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CcsQ9WU84 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CcsQ9WU84 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CcsQ9WU84 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CcsQ9WU84 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms