Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Mir6982-201ENSMUST00000184354 68 ntBASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pfdn5Q9WU28 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn5Q9WU28 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Gm43767-201ENSMUST00000198933 381 ntBASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Grk6-207ENSMUST00000225925 2769 ntBASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn5Q9WU28 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn5Q9WU28 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms