Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ptpn4Q9WU22 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ptpn4Q9WU22 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Gm8749-201ENSMUST00000117737 331 ntBASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Gm15173-201ENSMUST00000122049 433 ntBASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Gm18041-201ENSMUST00000218210 618 ntBASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ptpn4Q9WU22 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Ptpn4Q9WU22 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.02□□□□□ -0.17
Ptpn4Q9WU22 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.02□□□□□ -0.17
Ptpn4Q9WU22 Gm14042-201ENSMUST00000120139 833 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms