Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Gm9229-201ENSMUST00000222777 126 ntBASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk3aQ9JKX8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Gm27306-201ENSMUST00000183970 107 ntBASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Gm33320-201ENSMUST00000192232 530 ntBASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Gm43703-201ENSMUST00000200523 763 ntBASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Gm7775-201ENSMUST00000218871 853 ntBASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Gm9063-201ENSMUST00000223299 582 ntBASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Upk3aQ9JKX8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Upk3aQ9JKX8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms