Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smco4Q9JIS3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Trmt13-210ENSMUST00000198454 880 ntBASIC11.4□□□□□ -0.58
Smco4Q9JIS3 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smco4Q9JIS3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smco4Q9JIS3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Smco4Q9JIS3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smco4Q9JIS3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Gm10602-201ENSMUST00000098239 609 ntBASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smco4Q9JIS3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms