Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.03■□□□□ -0
Nup50Q9JIH2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.03■□□□□ -0
Nup50Q9JIH2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.03■□□□□ -0
Nup50Q9JIH2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nup50Q9JIH2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Nup50Q9JIH2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Nup50Q9JIH2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.03■□□□□ -0
Nup50Q9JIH2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Gm17271-201ENSMUST00000165535 355 ntBASIC15.03■□□□□ -0
Nup50Q9JIH2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Gm44608-201ENSMUST00000206827 855 ntBASIC15.03■□□□□ -0
Nup50Q9JIH2 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.03■□□□□ -0
Nup50Q9JIH2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Nup50Q9JIH2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.03■□□□□ -0
Nup50Q9JIH2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nup50Q9JIH2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Nup50Q9JIH2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.02■□□□□ -0
Nup50Q9JIH2 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.02■□□□□ -0
Nup50Q9JIH2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.02■□□□□ -0
Nup50Q9JIH2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Gm15957-201ENSMUST00000118893 974 ntBASIC15.02■□□□□ -0
Nup50Q9JIH2 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.02■□□□□ -0
Nup50Q9JIH2 Gm15467-201ENSMUST00000120582 445 ntBASIC15.02■□□□□ -0
Nup50Q9JIH2 Gm18206-201ENSMUST00000207027 926 ntBASIC15.02■□□□□ -0
Nup50Q9JIH2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nup50Q9JIH2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup50Q9JIH2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup50Q9JIH2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.02□□□□□ -0.01
Nup50Q9JIH2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup50Q9JIH2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup50Q9JIH2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup50Q9JIH2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.02□□□□□ -0.01
Nup50Q9JIH2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nup50Q9JIH2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.01□□□□□ -0.01
Nup50Q9JIH2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nup50Q9JIH2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup50Q9JIH2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup50Q9JIH2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup50Q9JIH2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup50Q9JIH2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup50Q9JIH2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup50Q9JIH2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nup50Q9JIH2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nup50Q9JIH2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nup50Q9JIH2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nup50Q9JIH2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms