Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4bQ9D8B3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4bQ9D8B3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4bQ9D8B3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp4bQ9D8B3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Gm6222-201ENSMUST00000120787 396 ntBASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Gm11594-201ENSMUST00000122313 162 ntBASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chmp4bQ9D8B3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chmp4bQ9D8B3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm22065-201ENSMUST00000103753 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm22066-201ENSMUST00000103761 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm24932-201ENSMUST00000103763 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm24115-201ENSMUST00000103799 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm22190-201ENSMUST00000103827 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm22191-201ENSMUST00000103831 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm24721-201ENSMUST00000103849 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm28018-201ENSMUST00000103869 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm26399-201ENSMUST00000103937 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm25349-201ENSMUST00000177728 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm23616-201ENSMUST00000177797 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm25871-201ENSMUST00000177816 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm24752-201ENSMUST00000178240 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm24496-201ENSMUST00000178287 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm25649-201ENSMUST00000178476 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm25548-201ENSMUST00000178681 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm23147-201ENSMUST00000178841 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm26095-201ENSMUST00000179270 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm22171-201ENSMUST00000179283 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm23936-201ENSMUST00000179354 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm22619-201ENSMUST00000179516 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm25255-201ENSMUST00000179579 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm24755-201ENSMUST00000179691 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm26506-201ENSMUST00000179692 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm25086-201ENSMUST00000179931 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm23243-201ENSMUST00000180047 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm24659-201ENSMUST00000180212 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm24169-201ENSMUST00000180244 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm23689-201ENSMUST00000180354 110 ntBASIC17.91■□□□□ 0.46
Chmp4bQ9D8B3 Gm27359-201ENSMUST00000184153 110 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms