Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
Ccdc7Q9D541 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Ccdc7Q9D541 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Ccdc7Q9D541 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc7Q9D541 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Gm18206-201ENSMUST00000207027 926 ntBASIC16.64■□□□□ 0.25
Ccdc7Q9D541 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc7Q9D541 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Gm25911-201ENSMUST00000157621 56 ntBASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Gm38225-201ENSMUST00000194001 393 ntBASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc7Q9D541 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Gm13015-201ENSMUST00000118674 204 ntBASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc7Q9D541 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.61■□□□□ 0.25
Ccdc7Q9D541 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc7Q9D541 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms