Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Mrpl55Q9CZ83 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Gm15358-201ENSMUST00000119249 520 ntBASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Gm9727-201ENSMUST00000161387 555 ntBASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 AC151836.1-202ENSMUST00000226259 753 ntBASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Mrpl55Q9CZ83 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gm14780-201ENSMUST00000118387 2737 ntBASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gm11779-201ENSMUST00000118541 368 ntBASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gm2308-201ENSMUST00000166539 1004 ntBASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gm6736-201ENSMUST00000166583 948 ntBASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms