Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cldnd1Q9CQX5 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm16177-201ENSMUST00000120728 718 ntBASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm44397-201ENSMUST00000195950 113 ntBASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm43822-201ENSMUST00000200285 476 ntBASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Gm9823-201ENSMUST00000051212 327 ntBASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cldnd1Q9CQX5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm24420-201ENSMUST00000176676 59 ntBASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm27772-201ENSMUST00000184900 187 ntBASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldnd1Q9CQX5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldnd1Q9CQX5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms