Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ska1Q9CPV1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Gm13464-201ENSMUST00000119418 935 ntBASIC13.46□□□□□ -0.25
Ska1Q9CPV1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Gm27628-201ENSMUST00000184911 107 ntBASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Gm2272-201ENSMUST00000194903 582 ntBASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ska1Q9CPV1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ska1Q9CPV1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Ska1Q9CPV1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.46□□□□□ -0.26
Ska1Q9CPV1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.46□□□□□ -0.26
Ska1Q9CPV1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ska1Q9CPV1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ska1Q9CPV1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ska1Q9CPV1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Ska1Q9CPV1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ska1Q9CPV1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gm14042-201ENSMUST00000120139 833 ntBASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gm2651-201ENSMUST00000203560 838 ntBASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.45□□□□□ -0.26
Ska1Q9CPV1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ska1Q9CPV1 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms