Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim34aQ99PP6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim34aQ99PP6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim34aQ99PP6 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Gm17794-201ENSMUST00000220252 955 ntBASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Efs-202ENSMUST00000227037 2540 ntBASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim34aQ99PP6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim34aQ99PP6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim34aQ99PP6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms