Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Gm27628-201ENSMUST00000184911 107 ntBASIC13.98□□□□□ -0.17
Trim8Q99PJ2 AW822252-206ENSMUST00000208904 237 ntBASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim8Q99PJ2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Gm16198-201ENSMUST00000118766 670 ntBASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim8Q99PJ2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim8Q99PJ2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim8Q99PJ2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms