Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap3Q99LM2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap3Q99LM2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap3Q99LM2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Gm18733-201ENSMUST00000173950 856 ntBASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Gm27920-201ENSMUST00000183953 96 ntBASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdk5rap3Q99LM2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdk5rap3Q99LM2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Rpph1-201ENSMUST00000175096 319 ntBASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdk5rap3Q99LM2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms