Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.71□□□□□ -0.37
Thumpd1Q99J36 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thumpd1Q99J36 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thumpd1Q99J36 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gm15173-201ENSMUST00000122049 433 ntBASIC12.7□□□□□ -0.38
Thumpd1Q99J36 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gm25925-201ENSMUST00000158314 306 ntBASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gm6376-201ENSMUST00000209407 580 ntBASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Rps4l-201ENSMUST00000071745 943 ntBASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd1Q99J36 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Gm10275-202ENSMUST00000168697 495 ntBASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Gm10275-201ENSMUST00000092620 635 ntBASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd1Q99J36 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms