Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Gm15693-201ENSMUST00000120470 637 ntBASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Mir6956-201ENSMUST00000183598 62 ntBASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Gm5779-201ENSMUST00000218467 910 ntBASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha3Q91Y16 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha3Q91Y16 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Gm13015-201ENSMUST00000118674 204 ntBASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms