Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gm15358-201ENSMUST00000119249 520 ntBASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gm37935-201ENSMUST00000192012 982 ntBASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gm5867-201ENSMUST00000063197 592 ntBASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb3Q91XZ7 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb3Q91XZ7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb3Q91XZ7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms