Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm2451-201ENSMUST00000199447 999 ntBASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Gm10290-201ENSMUST00000200451 999 ntBASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Gm11025-201ENSMUST00000140773 466 ntBASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Olfr286-202ENSMUST00000205305 969 ntBASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Gm9182-201ENSMUST00000217829 639 ntBASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga3Q91XY5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhga3Q91XY5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhga3Q91XY5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhga3Q91XY5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhga3Q91XY5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhga3Q91XY5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhga3Q91XY5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhga3Q91XY5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Gm11543-201ENSMUST00000120758 370 ntBASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.7□□□□□ -0.38
Pcdhga3Q91XY5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms