Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.74□□□□□ -0.05
Trim60Q8VI40 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.74□□□□□ -0.05
Trim60Q8VI40 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Trim60Q8VI40 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.73□□□□□ -0.05
Trim60Q8VI40 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Gm9385-201ENSMUST00000117563 472 ntBASIC14.73□□□□□ -0.05
Trim60Q8VI40 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.73□□□□□ -0.05
Trim60Q8VI40 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim60Q8VI40 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim60Q8VI40 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 Gm15483-201ENSMUST00000120338 456 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Gm18733-201ENSMUST00000173950 856 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 Gm27920-201ENSMUST00000183953 96 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.72□□□□□ -0.05
Trim60Q8VI40 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim60Q8VI40 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms