Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Gm10355-201ENSMUST00000097146 517 ntBASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Gm10819-201ENSMUST00000099988 561 ntBASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpa1Q8VEE4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpa1Q8VEE4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms