Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Gm15487-201ENSMUST00000122373 465 ntBASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Gm27631-201ENSMUST00000184163 466 ntBASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.46□□□□□ -0.26
Ndc1Q8VCB1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Dupd1-202ENSMUST00000224735 548 ntBASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Gm2423-201ENSMUST00000074863 733 ntBASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Ndc1Q8VCB1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms