Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Gm25016-201ENSMUST00000158399 131 ntBASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Ccdc9Q8VC31 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc9Q8VC31 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc9Q8VC31 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc9Q8VC31 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc9Q8VC31 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Gm6659-201ENSMUST00000174752 547 ntBASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc9Q8VC31 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms