Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpp40Q8R1F9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Gm27838-201ENSMUST00000184829 128 ntBASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpp40Q8R1F9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rpp40Q8R1F9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Gm29667-201ENSMUST00000190817 490 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms