Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gm12997-201ENSMUST00000120207 640 ntBASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gm4271-201ENSMUST00000174444 973 ntBASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gm27320-201ENSMUST00000184892 109 ntBASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx54Q8K4L0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Gm2383-201ENSMUST00000181461 807 ntBASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Gm5850-201ENSMUST00000192923 1206 ntBASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx54Q8K4L0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ddx54Q8K4L0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ddx54Q8K4L0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm8213-201ENSMUST00000118191 441 ntBASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm43138-201ENSMUST00000199123 708 ntBASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm42550-201ENSMUST00000201553 960 ntBASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm10608-202ENSMUST00000213924 676 ntBASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx54Q8K4L0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms