Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col23a1Q8K4G2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Gm13297-201ENSMUST00000120205 934 ntBASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Gm25668-201ENSMUST00000157700 129 ntBASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Gm6222-202ENSMUST00000182143 629 ntBASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col23a1Q8K4G2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col23a1Q8K4G2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col23a1Q8K4G2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col23a1Q8K4G2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col23a1Q8K4G2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col23a1Q8K4G2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms