Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.58□□□□□ -0.08
CopaQ8CIE6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Gm38225-201ENSMUST00000194001 393 ntBASIC14.58□□□□□ -0.08
CopaQ8CIE6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CopaQ8CIE6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.58□□□□□ -0.08
CopaQ8CIE6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.58□□□□□ -0.08
CopaQ8CIE6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CopaQ8CIE6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Gm27920-201ENSMUST00000183953 96 ntBASIC14.57□□□□□ -0.08
CopaQ8CIE6 Gm27321-201ENSMUST00000185021 205 ntBASIC14.57□□□□□ -0.08
CopaQ8CIE6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.57□□□□□ -0.08
CopaQ8CIE6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Gm43767-201ENSMUST00000198933 381 ntBASIC14.57□□□□□ -0.08
CopaQ8CIE6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CopaQ8CIE6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Gm9824-201ENSMUST00000178707 561 ntBASIC14.56□□□□□ -0.08
CopaQ8CIE6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CopaQ8CIE6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Gm6415-201ENSMUST00000118488 348 ntBASIC14.55□□□□□ -0.08
CopaQ8CIE6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms