Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.39■□□□□ 0.53
Rab11fip3Q8CHD8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Gm5279-201ENSMUST00000199575 745 ntBASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Gm17795-201ENSMUST00000214505 757 ntBASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Gm6180-201ENSMUST00000065243 498 ntBASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip3Q8CHD8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Mir6392-201ENSMUST00000184924 108 ntBASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip3Q8CHD8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Gm18905-201ENSMUST00000205454 928 ntBASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Gm7653-201ENSMUST00000214567 508 ntBASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rab11fip3Q8CHD8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip3Q8CHD8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
Rab11fip3Q8CHD8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip3Q8CHD8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip3Q8CHD8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rab11fip3Q8CHD8 Gm23984-201ENSMUST00000157139 203 ntBASIC18.35■□□□□ 0.53
Rab11fip3Q8CHD8 Gm6745-201ENSMUST00000199216 526 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms