Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Psmb5-202ENSMUST00000227257 622 ntBASIC12.7□□□□□ -0.38
ShfQ8CG80 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.7□□□□□ -0.38
ShfQ8CG80 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
ShfQ8CG80 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ShfQ8CG80 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ShfQ8CG80 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ShfQ8CG80 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Gm15427-201ENSMUST00000117288 531 ntBASIC12.69□□□□□ -0.38
ShfQ8CG80 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.69□□□□□ -0.38
ShfQ8CG80 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ShfQ8CG80 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Gm44608-201ENSMUST00000206827 855 ntBASIC12.69□□□□□ -0.38
ShfQ8CG80 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.69□□□□□ -0.38
ShfQ8CG80 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ShfQ8CG80 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ShfQ8CG80 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ShfQ8CG80 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.68□□□□□ -0.38
ShfQ8CG80 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
ShfQ8CG80 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ShfQ8CG80 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.68□□□□□ -0.38
ShfQ8CG80 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.68□□□□□ -0.38
ShfQ8CG80 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
ShfQ8CG80 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.68□□□□□ -0.38
ShfQ8CG80 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.68□□□□□ -0.38
ShfQ8CG80 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
ShfQ8CG80 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ShfQ8CG80 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ShfQ8CG80 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ShfQ8CG80 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms