Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Gm15824-201ENSMUST00000119516 955 ntBASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc17Q8CE13 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc17Q8CE13 Gm13464-201ENSMUST00000119418 935 ntBASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Mir7085-201ENSMUST00000184353 66 ntBASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Gm45453-201ENSMUST00000211758 853 ntBASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Gm9229-201ENSMUST00000222777 126 ntBASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc17Q8CE13 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Gm13829-201ENSMUST00000119600 138 ntBASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Mir6392-201ENSMUST00000184924 108 ntBASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Gm18062-201ENSMUST00000208020 547 ntBASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Gm18055-201ENSMUST00000208254 547 ntBASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc17Q8CE13 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Ccdc17Q8CE13 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc17Q8CE13 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.75□□□□□ -0.05
Ccdc17Q8CE13 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc17Q8CE13 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc17Q8CE13 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms