Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps53Q8CCB4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Gm13453-201ENSMUST00000118708 357 ntBASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps53Q8CCB4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Gm8410-201ENSMUST00000117225 605 ntBASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Gm9726-201ENSMUST00000180321 678 ntBASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms