Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Lysmd4Q8CC84 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Grk6-205ENSMUST00000224653 2976 ntBASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd4Q8CC84 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Gm7153-201ENSMUST00000117092 455 ntBASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Mir8098-201ENSMUST00000184011 137 ntBASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms