Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp43Q8BUM9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Mir449b-201ENSMUST00000104833 80 ntBASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Gm26308-201ENSMUST00000157768 69 ntBASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Gm5779-201ENSMUST00000218467 910 ntBASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp43Q8BUM9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Gm44608-201ENSMUST00000206827 855 ntBASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp43Q8BUM9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Gm7774-201ENSMUST00000200064 533 ntBASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp43Q8BUM9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms