Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Gm15483-201ENSMUST00000120338 456 ntBASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Gm11543-201ENSMUST00000120758 370 ntBASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Gm22175-201ENSMUST00000175007 78 ntBASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Gm27430-201ENSMUST00000184585 107 ntBASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Gm44333-201ENSMUST00000197168 107 ntBASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Depdc1bQ8BH88 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Depdc1bQ8BH88 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Depdc1bQ8BH88 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Depdc1bQ8BH88 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms