Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Gm7862-201ENSMUST00000121461 292 ntBASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm37230-201ENSMUST00000194491 818 ntBASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm45747-201ENSMUST00000212203 999 ntBASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3bQ80YF6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Gm13036-201ENSMUST00000117799 748 ntBASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk3bQ80YF6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.04□□□□□ -0.48
Upk3bQ80YF6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms