Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Gm11025-201ENSMUST00000140773 466 ntBASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nucks1Q80XU3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.23■□□□□ 0.03
Nucks1Q80XU3 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.23■□□□□ 0.03
Nucks1Q80XU3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nucks1Q80XU3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Gm20553-201ENSMUST00000204205 844 ntBASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nucks1Q80XU3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nucks1Q80XU3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Nucks1Q80XU3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nucks1Q80XU3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nucks1Q80XU3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nucks1Q80XU3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nucks1Q80XU3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms