Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Gm7488-201ENSMUST00000117148 684 ntBASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Gm15393-201ENSMUST00000120499 219 ntBASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh19Q80TF3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Gm15957-201ENSMUST00000118893 974 ntBASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms