Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Gm5745-201ENSMUST00000183748 313 ntBASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh8Q7TSK3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh8Q7TSK3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Gm7488-201ENSMUST00000117148 684 ntBASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Gm11424-201ENSMUST00000121929 829 ntBASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh8Q7TSK3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Gm3436-201ENSMUST00000179930 840 ntBASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms