Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rtl1Q7M732 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rtl1Q7M732 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rtl1Q7M732 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rtl1Q7M732 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC25.05■■□□□ 1.6
Rtl1Q7M732 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Gm37015-201ENSMUST00000192763 1521 ntBASIC25.05■■□□□ 1.6
Rtl1Q7M732 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rtl1Q7M732 Gm13859-201ENSMUST00000119936 1423 ntBASIC25.04■■□□□ 1.6
Rtl1Q7M732 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Gm6983-201ENSMUST00000214912 628 ntBASIC25.04■■□□□ 1.6
Rtl1Q7M732 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rtl1Q7M732 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Gm11478-201ENSMUST00000117851 599 ntBASIC25.03■■□□□ 1.6
Rtl1Q7M732 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Gm8598-201ENSMUST00000221184 836 ntBASIC25.03■■□□□ 1.6
Rtl1Q7M732 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rtl1Q7M732 Gm21038-201ENSMUST00000222205 1383 ntBASIC25.02■■□□□ 1.6
Rtl1Q7M732 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Gm13689-201ENSMUST00000119360 685 ntBASIC25.02■■□□□ 1.6
Rtl1Q7M732 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Zkscan14-203ENSMUST00000198959 2243 ntBASIC25.02■■□□□ 1.6
Rtl1Q7M732 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rtl1Q7M732 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
Rtl1Q7M732 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rtl1Q7M732 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rtl1Q7M732 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC25.01■■□□□ 1.59
Rtl1Q7M732 AC125117.1-201ENSMUST00000228121 468 ntBASIC25.01■■□□□ 1.59
Rtl1Q7M732 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rtl1Q7M732 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rtl1Q7M732 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rtl1Q7M732 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rtl1Q7M732 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC25.01■■□□□ 1.59
Rtl1Q7M732 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Rtl1Q7M732 AC122335.2-201ENSMUST00000213901 6181 ntBASIC25.01■■□□□ 1.59
Rtl1Q7M732 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rtl1Q7M732 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rtl1Q7M732 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Rtl1Q7M732 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Rtl1Q7M732 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
Rtl1Q7M732 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rtl1Q7M732 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Rtl1Q7M732 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms