Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Gm13418-201ENSMUST00000119097 944 ntBASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Gm13836-201ENSMUST00000121159 501 ntBASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TwistnbQ78WZ7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TwistnbQ78WZ7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.52□□□□□ -0.09
TwistnbQ78WZ7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Gm27357-201ENSMUST00000183754 135 ntBASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TwistnbQ78WZ7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TwistnbQ78WZ7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms