Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Clcn1Q64347 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Clcn1Q64347 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Clcn1Q64347 Gm15824-201ENSMUST00000119516 955 ntBASIC18.01■□□□□ 0.47
Clcn1Q64347 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Clcn1Q64347 Gm28911-201ENSMUST00000188837 117 ntBASIC18.01■□□□□ 0.47
Clcn1Q64347 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn1Q64347 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn1Q64347 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn1Q64347 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18■□□□□ 0.47
Clcn1Q64347 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18■□□□□ 0.47
Clcn1Q64347 Gm27892-201ENSMUST00000185017 106 ntBASIC18■□□□□ 0.47
Clcn1Q64347 AC153872.1-201ENSMUST00000199539 128 ntBASIC18■□□□□ 0.47
Clcn1Q64347 Gm19220-201ENSMUST00000222682 803 ntBASIC18■□□□□ 0.47
Clcn1Q64347 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Clcn1Q64347 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Clcn1Q64347 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18■□□□□ 0.47
Clcn1Q64347 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn1Q64347 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Gm43630-201ENSMUST00000201550 776 ntBASIC17.99■□□□□ 0.47
Clcn1Q64347 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.99■□□□□ 0.47
Clcn1Q64347 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Clcn1Q64347 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Clcn1Q64347 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Carlr-201ENSMUST00000181515 2574 ntBASIC17.98■□□□□ 0.47
Clcn1Q64347 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Clcn1Q64347 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Clcn1Q64347 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Clcn1Q64347 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Gm5354-201ENSMUST00000182417 973 ntBASIC17.98■□□□□ 0.47
Clcn1Q64347 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.98■□□□□ 0.47
Clcn1Q64347 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.98■□□□□ 0.47
Clcn1Q64347 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.98■□□□□ 0.47
Clcn1Q64347 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Clcn1Q64347 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Clcn1Q64347 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Clcn1Q64347 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.98■□□□□ 0.47
Clcn1Q64347 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcn1Q64347 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Clcn1Q64347 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.97■□□□□ 0.47
Clcn1Q64347 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clcn1Q64347 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms