Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VcanQ62059 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VcanQ62059 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VcanQ62059 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.12□□□□□ -0.31
VcanQ62059 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VcanQ62059 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VcanQ62059 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Gm11439-201ENSMUST00000118598 409 ntBASIC13.11□□□□□ -0.31
VcanQ62059 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Gm9550-201ENSMUST00000161130 862 ntBASIC13.11□□□□□ -0.31
VcanQ62059 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.11□□□□□ -0.31
VcanQ62059 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.11□□□□□ -0.31
VcanQ62059 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.11□□□□□ -0.31
VcanQ62059 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.11□□□□□ -0.31
VcanQ62059 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.11□□□□□ -0.31
VcanQ62059 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VcanQ62059 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VcanQ62059 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Gm13047-201ENSMUST00000117116 815 ntBASIC13.11□□□□□ -0.31
VcanQ62059 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VcanQ62059 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VcanQ62059 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VcanQ62059 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
VcanQ62059 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.11□□□□□ -0.31
VcanQ62059 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VcanQ62059 Gm6152-201ENSMUST00000151704 340 ntBASIC13.11□□□□□ -0.31
VcanQ62059 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VcanQ62059 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.1□□□□□ -0.31
VcanQ62059 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.1□□□□□ -0.31
VcanQ62059 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.1□□□□□ -0.31
VcanQ62059 Gm4607-201ENSMUST00000206649 577 ntBASIC13.1□□□□□ -0.31
VcanQ62059 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.1□□□□□ -0.31
VcanQ62059 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
VcanQ62059 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
VcanQ62059 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.1□□□□□ -0.31
VcanQ62059 Gm18893-201ENSMUST00000198416 943 ntBASIC13.1□□□□□ -0.31
VcanQ62059 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
VcanQ62059 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.1□□□□□ -0.31
VcanQ62059 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcanQ62059 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.09□□□□□ -0.31
VcanQ62059 Gm25668-201ENSMUST00000157700 129 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Gm37489-201ENSMUST00000191883 159 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.09□□□□□ -0.31
VcanQ62059 Gm44100-201ENSMUST00000204329 436 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Gm10608-202ENSMUST00000213924 676 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VcanQ62059 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Gm7857-201ENSMUST00000117957 358 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.09□□□□□ -0.31
VcanQ62059 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VcanQ62059 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcanQ62059 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
VcanQ62059 Mir686-201ENSMUST00000102174 109 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
VcanQ62059 Gm14277-201ENSMUST00000121195 360 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.09□□□□□ -0.31
VcanQ62059 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.09□□□□□ -0.31
VcanQ62059 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.09□□□□□ -0.31
VcanQ62059 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms