Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gli3Q61602 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.79■□□□□ 0.6
Gli3Q61602 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gli3Q61602 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Gli3Q61602 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC18.78■□□□□ 0.6
Gli3Q61602 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC18.78■□□□□ 0.6
Gli3Q61602 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC18.78■□□□□ 0.6
Gli3Q61602 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC18.78■□□□□ 0.6
Gli3Q61602 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC18.78■□□□□ 0.6
Gli3Q61602 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.78■□□□□ 0.6
Gli3Q61602 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gli3Q61602 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.78■□□□□ 0.6
Gli3Q61602 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gli3Q61602 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gli3Q61602 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gli3Q61602 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gli3Q61602 Gm43081-201ENSMUST00000199082 1380 ntBASIC18.77■□□□□ 0.6
Gli3Q61602 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.77■□□□□ 0.6
Gli3Q61602 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.77■□□□□ 0.6
Gli3Q61602 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Gli3Q61602 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC18.77■□□□□ 0.6
Gli3Q61602 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gli3Q61602 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.77■□□□□ 0.6
Gli3Q61602 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli3Q61602 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gli3Q61602 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gli3Q61602 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gli3Q61602 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Gm12403-201ENSMUST00000121384 959 ntBASIC18.76■□□□□ 0.59
Gli3Q61602 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Gm4335-201ENSMUST00000182581 1004 ntBASIC18.76■□□□□ 0.59
Gli3Q61602 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC18.76■□□□□ 0.59
Gli3Q61602 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC18.76■□□□□ 0.59
Gli3Q61602 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC18.76■□□□□ 0.59
Gli3Q61602 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.76■□□□□ 0.59
Gli3Q61602 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.76■□□□□ 0.59
Gli3Q61602 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC18.76■□□□□ 0.59
Gli3Q61602 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC18.76■□□□□ 0.59
Gli3Q61602 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli3Q61602 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gli3Q61602 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gli3Q61602 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms