Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm22709-201ENSMUST00000116893 111 ntBASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm5133-201ENSMUST00000118940 1255 ntBASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm11745-201ENSMUST00000121669 448 ntBASIC10.57□□□□□ -0.72
Foxc1Q61572 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm17790-201ENSMUST00000191545 1228 ntBASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm44251-201ENSMUST00000204963 442 ntBASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Foxc1Q61572 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Foxc1Q61572 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.57□□□□□ -0.72
Foxc1Q61572 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.57□□□□□ -0.72
Foxc1Q61572 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm14539-201ENSMUST00000117527 174 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm9385-201ENSMUST00000117563 472 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm14659-201ENSMUST00000117667 843 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm38018-201ENSMUST00000195651 540 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm44335-201ENSMUST00000196879 141 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm44297-201ENSMUST00000198304 141 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm44346-201ENSMUST00000198851 141 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Gm5312-201ENSMUST00000203728 547 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Rubie-203ENSMUST00000227803 2430 ntBASIC10.56□□□□□ -0.72
Foxc1Q61572 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Foxc1Q61572 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Foxc1Q61572 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.55□□□□□ -0.72
Foxc1Q61572 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Foxc1Q61572 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Foxc1Q61572 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms