Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Six4Q61321 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six4Q61321 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Six4Q61321 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Six4Q61321 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Six4Q61321 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.36□□□□□ -0.11
Six4Q61321 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.36□□□□□ -0.11
Six4Q61321 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.36□□□□□ -0.11
Six4Q61321 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Six4Q61321 Gm8584-201ENSMUST00000171982 758 ntBASIC14.36□□□□□ -0.11
Six4Q61321 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.36□□□□□ -0.11
Six4Q61321 Gm44344-201ENSMUST00000200287 129 ntBASIC14.36□□□□□ -0.11
Six4Q61321 Gm46209-201ENSMUST00000217912 553 ntBASIC14.36□□□□□ -0.11
Six4Q61321 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Six4Q61321 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Six4Q61321 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Six4Q61321 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.36□□□□□ -0.11
Six4Q61321 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.36□□□□□ -0.11
Six4Q61321 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Six4Q61321 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.36□□□□□ -0.11
Six4Q61321 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Six4Q61321 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six4Q61321 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Six4Q61321 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Six4Q61321 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Six4Q61321 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.35□□□□□ -0.11
Six4Q61321 Gm27680-201ENSMUST00000184192 160 ntBASIC14.35□□□□□ -0.11
Six4Q61321 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.35□□□□□ -0.11
Six4Q61321 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.35□□□□□ -0.11
Six4Q61321 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.35□□□□□ -0.11
Six4Q61321 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Six4Q61321 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Six4Q61321 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Six4Q61321 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six4Q61321 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Six4Q61321 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Six4Q61321 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms