Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Gm6266-201ENSMUST00000203844 806 ntBASIC14.48□□□□□ -0.09
Spire1Q52KF3 Gm5035-201ENSMUST00000215581 927 ntBASIC14.48□□□□□ -0.09
Spire1Q52KF3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Spire1Q52KF3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.47□□□□□ -0.09
Spire1Q52KF3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.47□□□□□ -0.09
Spire1Q52KF3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Spire1Q52KF3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Gm27892-201ENSMUST00000185017 106 ntBASIC14.46□□□□□ -0.09
Spire1Q52KF3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Gm44719-201ENSMUST00000206404 149 ntBASIC14.46□□□□□ -0.09
Spire1Q52KF3 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.46□□□□□ -0.09
Spire1Q52KF3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Spire1Q52KF3 Carlr-201ENSMUST00000181515 2574 ntBASIC14.46□□□□□ -0.09
Spire1Q52KF3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Spire1Q52KF3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.46□□□□□ -0.09
Spire1Q52KF3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Spire1Q52KF3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Spire1Q52KF3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Spire1Q52KF3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Spire1Q52KF3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.45□□□□□ -0.1
Spire1Q52KF3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.45□□□□□ -0.1
Spire1Q52KF3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms