Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Gm23270-201ENSMUST00000104055 131 ntBASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Gm13875-201ENSMUST00000120162 282 ntBASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Gm10051-201ENSMUST00000145209 414 ntBASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Gm18734-201ENSMUST00000172937 808 ntBASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Mir483-201ENSMUST00000093631 73 ntBASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Gm18630-201ENSMUST00000222109 1397 ntBASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Herc2Q4U2R1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm14460-201ENSMUST00000121511 639 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm10076-201ENSMUST00000073238 384 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm45224-201ENSMUST00000208203 414 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Mir680-2-201ENSMUST00000102163 110 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm23251-201ENSMUST00000103773 110 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm17208-201ENSMUST00000168388 535 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm8738-201ENSMUST00000172606 329 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Gm25700-201ENSMUST00000177693 110 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Herc2Q4U2R1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Mir181d-201ENSMUST00000102383 72 ntBASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Gm31256-201ENSMUST00000194705 506 ntBASIC8.21□□□□□ -1.09
Herc2Q4U2R1 CT025694.1-201ENSMUST00000226188 934 ntBASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Gm10313-201ENSMUST00000095320 1002 ntBASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Herc2Q4U2R1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Mir671-201ENSMUST00000102432 98 ntBASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC8.21□□□□□ -1.1
Herc2Q4U2R1 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms