Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Gm28631-201ENSMUST00000190740 334 ntBASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38aQ4FK66 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Gm9794-201ENSMUST00000202370 423 ntBASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf38aQ4FK66 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38aQ4FK66 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38aQ4FK66 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38aQ4FK66 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf38aQ4FK66 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Gm37714-201ENSMUST00000194742 342 ntBASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.58■□□□□ 0.24
Prpf38aQ4FK66 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms