Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Znf48Q3US17 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Gm12439-201ENSMUST00000117162 365 ntBASIC11.87□□□□□ -0.51
Znf48Q3US17 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.87□□□□□ -0.51
Znf48Q3US17 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.87□□□□□ -0.51
Znf48Q3US17 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Gm5779-201ENSMUST00000218467 910 ntBASIC11.87□□□□□ -0.51
Znf48Q3US17 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.87□□□□□ -0.51
Znf48Q3US17 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Znf48Q3US17 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.86□□□□□ -0.51
Znf48Q3US17 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 Gm14127-201ENSMUST00000117906 678 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Znf48Q3US17 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Gm18057-201ENSMUST00000208220 503 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 Gm45696-201ENSMUST00000212088 985 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.86□□□□□ -0.51
Znf48Q3US17 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.86□□□□□ -0.51
Znf48Q3US17 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.86□□□□□ -0.51
Znf48Q3US17 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Znf48Q3US17 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms